Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.67□□□□□ -0.54
APOC3P02656 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
APOC3P02656 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
APOC3P02656 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
APOC3P02656 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.67□□□□□ -0.54
APOC3P02656 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
APOC3P02656 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 VENTXP7-201ENST00000475503 772 ntBASIC11.67□□□□□ -0.54
APOC3P02656 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.67□□□□□ -0.54
APOC3P02656 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.67□□□□□ -0.54
APOC3P02656 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.67□□□□□ -0.54
APOC3P02656 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
APOC3P02656 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
APOC3P02656 AC006058.3-201ENST00000606217 1069 ntBASIC11.67□□□□□ -0.54
APOC3P02656 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.67□□□□□ -0.54
APOC3P02656 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC11.67□□□□□ -0.54
APOC3P02656 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
APOC3P02656 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
APOC3P02656 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC11.67□□□□□ -0.54
APOC3P02656 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC11.67□□□□□ -0.54
APOC3P02656 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.67□□□□□ -0.54
APOC3P02656 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC3P02656 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
APOC3P02656 GUCY2EP-203ENST00000531117 1918 ntBASIC11.66□□□□□ -0.54
APOC3P02656 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 SHC1P1-201ENST00000425230 1745 ntBASIC11.66□□□□□ -0.54
APOC3P02656 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 AC093525.7-201ENST00000569852 3626 ntBASIC11.66□□□□□ -0.54
APOC3P02656 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
APOC3P02656 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
APOC3P02656 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.66□□□□□ -0.54
APOC3P02656 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC11.66□□□□□ -0.54
APOC3P02656 VENTXP5-201ENST00000523979 775 ntBASIC11.66□□□□□ -0.54
APOC3P02656 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.66□□□□□ -0.54
APOC3P02656 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.66□□□□□ -0.54
APOC3P02656 KRT18P8-201ENST00000581937 1246 ntBASIC11.66□□□□□ -0.54
APOC3P02656 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.66□□□□□ -0.54
APOC3P02656 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC3P02656 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
APOC3P02656 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms