Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 AL008718.2-201ENST00000609206 1313 ntBASIC11.3□□□□□ -0.6
TRBV12-3P01733 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
TRBV12-3P01733 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
TRBV12-3P01733 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TRBV12-3P01733 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.3□□□□□ -0.6
TRBV12-3P01733 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TRBV12-3P01733 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TRBV12-3P01733 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 SBF1P1-201ENST00000444527 5631 ntBASIC11.29□□□□□ -0.6
TRBV12-3P01733 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 AL157407.1-201ENST00000435784 904 ntBASIC11.29□□□□□ -0.6
TRBV12-3P01733 ACTBP11-201ENST00000436287 1126 ntBASIC11.29□□□□□ -0.6
TRBV12-3P01733 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 AC104306.2-201ENST00000451877 341 ntBASIC11.29□□□□□ -0.6
TRBV12-3P01733 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 AC092658.1-201ENST00000505836 891 ntBASIC11.29□□□□□ -0.6
TRBV12-3P01733 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.29□□□□□ -0.6
TRBV12-3P01733 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 Z98259.2-201ENST00000641583 609 ntBASIC11.29□□□□□ -0.6
TRBV12-3P01733 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 AC027601.5-201ENST00000624065 2482 ntBASIC11.29□□□□□ -0.6
TRBV12-3P01733 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 ST20-AS1-201ENST00000560255 4223 ntBASIC11.29□□□□□ -0.6
TRBV12-3P01733 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRBV12-3P01733 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 MBLAC2-202ENST00000514906 1936 ntBASIC11.29□□□□□ -0.6
TRBV12-3P01733 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TRBV12-3P01733 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms