Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1AO95602 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1AO95602 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1AO95602 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
POLR1AO95602 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
POLR1AO95602 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
POLR1AO95602 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1AO95602 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1AO95602 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC20.59■□□□□ 0.89
POLR1AO95602 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC20.59■□□□□ 0.89
POLR1AO95602 HPD-204ENST00000543163 1709 ntTSL 5 BASIC20.59■□□□□ 0.89
POLR1AO95602 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR1AO95602 AL591424.3-201ENST00000614278 872 ntBASIC20.58■□□□□ 0.89
POLR1AO95602 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR1AO95602 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR1AO95602 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR1AO95602 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC20.58■□□□□ 0.89
POLR1AO95602 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
POLR1AO95602 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR1AO95602 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR1AO95602 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
POLR1AO95602 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1AO95602 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1AO95602 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
POLR1AO95602 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1AO95602 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1AO95602 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1AO95602 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC20.58■□□□□ 0.88
POLR1AO95602 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC20.58■□□□□ 0.88
POLR1AO95602 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1AO95602 MYADML-201ENST00000474610 2147 ntBASIC20.58■□□□□ 0.88
POLR1AO95602 PFN2-212ENST00000490975 858 ntTSL 4 BASIC20.58■□□□□ 0.88
POLR1AO95602 AC092612.1-201ENST00000514501 998 ntBASIC20.58■□□□□ 0.88
POLR1AO95602 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1AO95602 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC20.58■□□□□ 0.88
POLR1AO95602 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1AO95602 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC20.58■□□□□ 0.88
POLR1AO95602 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1AO95602 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1AO95602 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
POLR1AO95602 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR1AO95602 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC20.57■□□□□ 0.88
POLR1AO95602 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
POLR1AO95602 AC215219.1-201ENST00000400706 1817 ntBASIC20.57■□□□□ 0.88
POLR1AO95602 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 AL157823.1-201ENST00000403727 628 ntBASIC20.57■□□□□ 0.88
POLR1AO95602 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
POLR1AO95602 RN7SL767P-201ENST00000493013 295 ntBASIC20.57■□□□□ 0.88
POLR1AO95602 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC20.57■□□□□ 0.88
POLR1AO95602 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC20.57■□□□□ 0.88
POLR1AO95602 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC20.57■□□□□ 0.88
POLR1AO95602 TYMSP2-201ENST00000589501 424 ntBASIC20.57■□□□□ 0.88
POLR1AO95602 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC20.57■□□□□ 0.88
POLR1AO95602 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
POLR1AO95602 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR1AO95602 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR1AO95602 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR1AO95602 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
POLR1AO95602 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1AO95602 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC20.57■□□□□ 0.88
POLR1AO95602 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC20.56■□□□□ 0.88
POLR1AO95602 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
POLR1AO95602 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 NRADDP-201ENST00000437305 691 ntBASIC20.56■□□□□ 0.88
POLR1AO95602 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC20.56■□□□□ 0.88
POLR1AO95602 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC20.56■□□□□ 0.88
POLR1AO95602 CASP3-205ENST00000517513 964 ntTSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC20.56■□□□□ 0.88
POLR1AO95602 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC20.56■□□□□ 0.88
POLR1AO95602 MED11-202ENST00000573708 802 ntTSL 2 BASIC20.56■□□□□ 0.88
POLR1AO95602 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC20.56■□□□□ 0.88
POLR1AO95602 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1AO95602 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms