Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.75□□□□□ -0.37
XRCC2O43543 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.75□□□□□ -0.37
XRCC2O43543 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.75□□□□□ -0.37
XRCC2O43543 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.75□□□□□ -0.37
XRCC2O43543 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.75□□□□□ -0.37
XRCC2O43543 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 AL136309.1-201ENST00000403917 691 ntBASIC12.75□□□□□ -0.37
XRCC2O43543 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.75□□□□□ -0.37
XRCC2O43543 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.75□□□□□ -0.37
XRCC2O43543 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
XRCC2O43543 BEND3P1-201ENST00000421591 1944 ntBASIC12.75□□□□□ -0.37
XRCC2O43543 TMEM14DP-201ENST00000422205 345 ntBASIC12.75□□□□□ -0.37
XRCC2O43543 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.75□□□□□ -0.37
XRCC2O43543 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
XRCC2O43543 AL035414.1-201ENST00000451327 857 ntBASIC12.75□□□□□ -0.37
XRCC2O43543 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.75□□□□□ -0.37
XRCC2O43543 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
XRCC2O43543 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.75□□□□□ -0.37
XRCC2O43543 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
XRCC2O43543 SORD2P-201ENST00000558556 1069 ntBASIC12.75□□□□□ -0.37
XRCC2O43543 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.75□□□□□ -0.37
XRCC2O43543 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.75□□□□□ -0.37
XRCC2O43543 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.75□□□□□ -0.37
XRCC2O43543 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
XRCC2O43543 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.75□□□□□ -0.37
XRCC2O43543 IGHV3-72-202ENST00000621503 303 ntBASIC12.75□□□□□ -0.37
XRCC2O43543 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.75□□□□□ -0.37
XRCC2O43543 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
XRCC2O43543 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.75□□□□□ -0.37
XRCC2O43543 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 PEG13-201ENST00000631594 5667 ntBASIC12.74□□□□□ -0.37
XRCC2O43543 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
XRCC2O43543 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
XRCC2O43543 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.74□□□□□ -0.37
XRCC2O43543 ARSEP1-201ENST00000420443 635 ntBASIC12.74□□□□□ -0.37
XRCC2O43543 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.74□□□□□ -0.37
XRCC2O43543 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 COX5BP1-201ENST00000507622 393 ntBASIC12.74□□□□□ -0.37
XRCC2O43543 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
XRCC2O43543 AC078819.1-201ENST00000547454 765 ntBASIC12.74□□□□□ -0.37
XRCC2O43543 AC012085.1-201ENST00000548270 765 ntBASIC12.74□□□□□ -0.37
XRCC2O43543 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.74□□□□□ -0.37
XRCC2O43543 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.74□□□□□ -0.37
XRCC2O43543 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
XRCC2O43543 RN7SL713P-201ENST00000582127 302 ntBASIC12.74□□□□□ -0.37
XRCC2O43543 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.74□□□□□ -0.37
XRCC2O43543 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 AC008825.2-201ENST00000603374 718 ntBASIC12.74□□□□□ -0.37
XRCC2O43543 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.74□□□□□ -0.37
XRCC2O43543 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.74□□□□□ -0.37
XRCC2O43543 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms