Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CRISPLD2-201ENST00000262424 4586 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 RASA4DP-201ENST00000460726 1199 ntBASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 C1QBPP2-201ENST00000528754 825 ntBASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 AC011467.4-201ENST00000594891 528 ntBASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 SPTSSB-204ENST00000617024 1292 ntBASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 AL021155.1-201ENST00000438808 2637 ntBASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 SCN5A-206ENST00000425664 8450 ntTSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 WASHC2A-201ENST00000282633 4272 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 C14orf132-203ENST00000555004 7583 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CHKB-CPT1BH3BT56 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 FLJ30679-201ENST00000624773 1980 ntBASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 LRRFIP1P1-201ENST00000498774 2246 ntBASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 SEPT8-210ENST00000448933 4270 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 USP6NL-201ENST00000277575 4512 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 HCG4-201ENST00000418983 998 ntBASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC8.01□□□□□ -1.13
CHKB-CPT1BH3BT56 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms