Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.33□□□□□ -0.27
NPIPA3F8WFD2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.33□□□□□ -0.27
NPIPA3F8WFD2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA3F8WFD2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
NPIPA3F8WFD2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA3F8WFD2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
NPIPA3F8WFD2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA3F8WFD2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA3F8WFD2 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 AL031595.1-201ENST00000623969 4709 ntBASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 FAM58BP-201ENST00000439056 645 ntBASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 AC008805.1-201ENST00000590892 364 ntBASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 AC100757.4-201ENST00000626934 759 ntBASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPA3F8WFD2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AL390755.1-201ENST00000623716 2027 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC244394.1-201ENST00000435000 1665 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC079328.1-201ENST00000560358 952 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC132192.2-201ENST00000596206 1147 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC008825.2-201ENST00000603374 718 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC097724.1-201ENST00000609581 426 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC091812.3-201ENST00000621362 345 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms