Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 RPS18P9-201ENST00000482817 460 ntBASIC16.13■□□□□ 0.17
LOC285556D6RIA3 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 FAM187B2P-201ENST00000577135 713 ntBASIC16.13■□□□□ 0.17
LOC285556D6RIA3 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 VDAC1P11-201ENST00000458323 852 ntBASIC16.13■□□□□ 0.17
LOC285556D6RIA3 AC005777.1-201ENST00000588332 187 ntBASIC16.13■□□□□ 0.17
LOC285556D6RIA3 AL627230.2-201ENST00000613254 655 ntBASIC16.13■□□□□ 0.17
LOC285556D6RIA3 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 AL590824.1-201ENST00000403828 1349 ntBASIC16.13■□□□□ 0.17
LOC285556D6RIA3 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 AC015802.1-201ENST00000588104 1449 ntBASIC16.13■□□□□ 0.17
LOC285556D6RIA3 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 DKKL1P1-201ENST00000400550 698 ntBASIC16.12■□□□□ 0.17
LOC285556D6RIA3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 AL080243.1-201ENST00000423293 1060 ntBASIC16.12■□□□□ 0.17
LOC285556D6RIA3 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.12■□□□□ 0.17
LOC285556D6RIA3 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 MIR5001-201ENST00000580185 100 ntBASIC16.12■□□□□ 0.17
LOC285556D6RIA3 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 URAHP-205ENST00000610227 398 ntBASIC16.12■□□□□ 0.17
LOC285556D6RIA3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LOC285556D6RIA3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 IFNWP2-201ENST00000431203 580 ntBASIC16.11■□□□□ 0.17
LOC285556D6RIA3 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 AC018695.6-201ENST00000614011 534 ntBASIC16.11■□□□□ 0.17
LOC285556D6RIA3 MME-218ENST00000625667 363 ntTSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms