Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPB4C9JG80 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 AC007952.5-201ENST00000572818 1486 ntBASIC12.86□□□□□ -0.35
NPIPB4C9JG80 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 HLA-V-201ENST00000429037 534 ntBASIC12.86□□□□□ -0.35
NPIPB4C9JG80 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 KLF2P1-201ENST00000447438 1042 ntBASIC12.86□□□□□ -0.35
NPIPB4C9JG80 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 RNA5SP412-201ENST00000516234 123 ntBASIC12.86□□□□□ -0.35
NPIPB4C9JG80 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 SNX29P1-201ENST00000548357 1007 ntBASIC12.86□□□□□ -0.35
NPIPB4C9JG80 AL512310.5-201ENST00000551999 515 ntBASIC12.86□□□□□ -0.35
NPIPB4C9JG80 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 AL160314.3-201ENST00000556041 767 ntBASIC12.86□□□□□ -0.35
NPIPB4C9JG80 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 AC005324.6-201ENST00000587972 613 ntBASIC12.86□□□□□ -0.35
NPIPB4C9JG80 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 AL023803.2-201ENST00000620080 638 ntBASIC12.86□□□□□ -0.35
NPIPB4C9JG80 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 SHMT1P1-201ENST00000419974 1312 ntBASIC12.86□□□□□ -0.35
NPIPB4C9JG80 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPB4C9JG80 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 KRT18P36-201ENST00000411618 1276 ntBASIC12.85□□□□□ -0.35
NPIPB4C9JG80 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms