Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 NUS1P3-201ENST00000423502 862 ntBASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 AL138799.1-201ENST00000448213 1675 ntBASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 AL445250.1-201ENST00000641671 2259 ntBASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
HMGB1P1B2RPK0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 AC139712.1-201ENST00000378256 1875 ntBASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 AL928654.5-201ENST00000624831 2501 ntBASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 MRPL3P1-201ENST00000400109 1033 ntBASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 AC104692.2-201ENST00000603054 253 ntBASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB1P1B2RPK0 AC026271.4-201ENST00000578214 1833 ntBASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms