Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TBC1D3FA6NER0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 RNA5SP359-201ENST00000364838 113 ntBASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 AC026316.1-201ENST00000398900 414 ntBASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 OR2R1P-201ENST00000441404 914 ntBASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 AC103810.10-201ENST00000606504 343 ntBASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 MEG3_2.1-201ENST00000611456 105 ntBASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 AL365209.1-201ENST00000624418 6473 ntBASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.5□□□□□ -0.09
TBC1D3FA6NER0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms