Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AL512306.1-201ENST00000432698 848 ntBASIC12.69□□□□□ -0.38
MBD3L3A6NE82 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 LDHBP1-201ENST00000455730 1119 ntBASIC12.69□□□□□ -0.38
MBD3L3A6NE82 RPL18AP8-201ENST00000486071 528 ntBASIC12.69□□□□□ -0.38
MBD3L3A6NE82 MRPL22P1-201ENST00000505398 616 ntBASIC12.69□□□□□ -0.38
MBD3L3A6NE82 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 U62317.3-201ENST00000608319 855 ntBASIC12.69□□□□□ -0.38
MBD3L3A6NE82 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 MIR6842-201ENST00000612539 65 ntBASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AP003419.4-201ENST00000616071 517 ntBASIC12.69□□□□□ -0.38
MBD3L3A6NE82 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.69□□□□□ -0.38
MBD3L3A6NE82 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 TEKT4P2-202ENST00000559466 1312 ntBASIC12.68□□□□□ -0.38
MBD3L3A6NE82 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 AC079112.1-201ENST00000454972 939 ntBASIC12.68□□□□□ -0.38
MBD3L3A6NE82 RN7SL8P-201ENST00000461771 266 ntBASIC12.68□□□□□ -0.38
MBD3L3A6NE82 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 AC138701.2-201ENST00000553634 226 ntBASIC12.68□□□□□ -0.38
MBD3L3A6NE82 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 AC135983.4-201ENST00000564116 1262 ntBASIC12.68□□□□□ -0.38
MBD3L3A6NE82 RN7SL665P-201ENST00000578793 300 ntBASIC12.68□□□□□ -0.38
MBD3L3A6NE82 RPL17P45-201ENST00000586289 509 ntBASIC12.68□□□□□ -0.38
MBD3L3A6NE82 RN7SL736P-201ENST00000613111 269 ntBASIC12.68□□□□□ -0.38
MBD3L3A6NE82 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 AC113367.3-201ENST00000508316 1912 ntBASIC12.68□□□□□ -0.38
MBD3L3A6NE82 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
MBD3L3A6NE82 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms