Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 RN7SL555P-201ENST00000584742 339 ntBASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 RPL17P45-201ENST00000586289 509 ntBASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 MIR6842-201ENST00000612539 65 ntBASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 TUBB8P4-201ENST00000511806 1324 ntBASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 TNRC18P2-201ENST00000417666 2714 ntBASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.58■□□□□ 0.24
SYNPO2Q9UMS6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 AL022313.4-201ENST00000562756 2046 ntBASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 ERP29P1-201ENST00000442902 706 ntBASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 RPL18AP3-201ENST00000462885 528 ntBASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 AC005740.1-201ENST00000515639 522 ntBASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 AP000911.2-201ENST00000534330 502 ntBASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPO2Q9UMS6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AC253536.4-201ENST00000440539 267 ntBASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 AC067931.2-201ENST00000623655 2003 ntBASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPO2Q9UMS6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms