Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 ACTBP11-201ENST00000436287 1126 ntBASIC12.33□□□□□ -0.44
RNF7Q9UBF6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 AC005586.2-201ENST00000563946 837 ntBASIC12.33□□□□□ -0.44
RNF7Q9UBF6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 MIR4783-201ENST00000580343 82 ntBASIC12.33□□□□□ -0.44
RNF7Q9UBF6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 AC005695.3-201ENST00000614522 232 ntBASIC12.33□□□□□ -0.44
RNF7Q9UBF6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RNF7Q9UBF6 PEG13-201ENST00000631594 5667 ntBASIC12.33□□□□□ -0.44
RNF7Q9UBF6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 MIR1908-201ENST00000410394 80 ntBASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AL645933.1-201ENST00000440087 609 ntBASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AC005730.2-201ENST00000564549 1184 ntBASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.32□□□□□ -0.44
RNF7Q9UBF6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AC005912.2-201ENST00000619492 2400 ntBASIC12.32□□□□□ -0.44
RNF7Q9UBF6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF7Q9UBF6 AC097359.2-201ENST00000604992 2389 ntBASIC12.32□□□□□ -0.44
RNF7Q9UBF6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF7Q9UBF6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms