Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
KRTAP4-1Q9BYQ7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
KRTAP4-1Q9BYQ7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC7.39□□□□□ -1.23
KRTAP4-1Q9BYQ7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC138761.6-201ENST00000583997 1423 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AL109809.1-201ENST00000418979 1367 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 ENPP7P8-202ENST00000527856 1345 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC064801.2-201ENST00000625052 1303 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 FES-203ENST00000394302 2133 ntTSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 MIR1301-201ENST00000408518 82 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 PGAM1P11-201ENST00000416729 680 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AL080243.1-201ENST00000423293 1060 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 RN7SL288P-201ENST00000490496 291 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 RN7SL767P-201ENST00000493013 295 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 IGHEP2-201ENST00000519308 1256 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AP005264.5-201ENST00000590066 467 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AL031673.1-201ENST00000611460 466 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC026336.4-201ENST00000624565 1050 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 GOLGA8UP-201ENST00000527159 1755 ntBASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC7.38□□□□□ -1.23
KRTAP4-1Q9BYQ7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms