Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 INTS4P2-202ENST00000614726 2019 ntBASIC14.26□□□□□ -0.13
EBF4Q9BQW3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 TSEN15P1-201ENST00000423257 515 ntBASIC14.26□□□□□ -0.13
EBF4Q9BQW3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 FO681548.1-201ENST00000455617 1132 ntBASIC14.26□□□□□ -0.13
EBF4Q9BQW3 AC120045.2-201ENST00000567334 178 ntBASIC14.26□□□□□ -0.13
EBF4Q9BQW3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 AL158211.3-201ENST00000607385 239 ntBASIC14.26□□□□□ -0.13
EBF4Q9BQW3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 AC020910.5-201ENST00000623668 1865 ntBASIC14.26□□□□□ -0.13
EBF4Q9BQW3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EBF4Q9BQW3 AL590440.2-201ENST00000641973 1595 ntBASIC14.26□□□□□ -0.13
EBF4Q9BQW3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 AC125807.2-201ENST00000513358 3514 ntBASIC14.25□□□□□ -0.13
EBF4Q9BQW3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 AP006288.1-201ENST00000446065 395 ntBASIC14.25□□□□□ -0.13
EBF4Q9BQW3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 RPL13AP25-201ENST00000484130 612 ntBASIC14.25□□□□□ -0.13
EBF4Q9BQW3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EBF4Q9BQW3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms