Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 TCAM1P-207ENST00000485295 1537 ntBASIC10.73□□□□□ -0.69
MUC4Q99102 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC10.73□□□□□ -0.69
MUC4Q99102 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
MUC4Q99102 SNX1-214ENST00000625244 324 ntTSL 5 BASIC10.73□□□□□ -0.69
MUC4Q99102 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
MUC4Q99102 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 ALG3P1-201ENST00000508806 1114 ntBASIC10.72□□□□□ -0.69
MUC4Q99102 NEU3-203ENST00000529024 581 ntTSL 3 BASIC10.72□□□□□ -0.69
MUC4Q99102 RN7SL219P-201ENST00000582872 296 ntBASIC10.72□□□□□ -0.69
MUC4Q99102 AC133552.6-201ENST00000613406 534 ntBASIC10.72□□□□□ -0.69
MUC4Q99102 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 AC090643.2-201ENST00000623442 2029 ntBASIC10.72□□□□□ -0.69
MUC4Q99102 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 TUBB1P2-201ENST00000422712 1306 ntBASIC10.72□□□□□ -0.69
MUC4Q99102 TUBB1P1-201ENST00000503144 1300 ntBASIC10.72□□□□□ -0.69
MUC4Q99102 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
MUC4Q99102 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 AC108725.1-201ENST00000495472 409 ntBASIC10.72□□□□□ -0.69
MUC4Q99102 GCOM2-201ENST00000509133 1104 ntBASIC10.72□□□□□ -0.69
MUC4Q99102 ZNF767P-206ENST00000513792 565 ntBASIC10.72□□□□□ -0.69
MUC4Q99102 AC068587.3-201ENST00000526613 355 ntBASIC10.72□□□□□ -0.69
MUC4Q99102 ORC6-206ENST00000568364 888 ntTSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 PIGL-212ENST00000581006 554 ntTSL 4 BASIC10.72□□□□□ -0.69
MUC4Q99102 NAT9-224ENST00000583757 583 ntTSL 3 BASIC10.72□□□□□ -0.69
MUC4Q99102 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
MUC4Q99102 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.72□□□□□ -0.69
MUC4Q99102 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
MUC4Q99102 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
MUC4Q99102 AC023794.5-201ENST00000564380 2157 ntBASIC10.71□□□□□ -0.69
MUC4Q99102 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
MUC4Q99102 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
MUC4Q99102 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
MUC4Q99102 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
MUC4Q99102 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
MUC4Q99102 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
MUC4Q99102 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
MUC4Q99102 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms