Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RPGRQ92834 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.79■□□□□ 0.44
RPGRQ92834 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.79■□□□□ 0.44
RPGRQ92834 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 LINC00528-201ENST00000600723 2160 ntBASIC17.79■□□□□ 0.44
RPGRQ92834 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPGRQ92834 CICP6-201ENST00000457191 2729 ntBASIC17.78■□□□□ 0.44
RPGRQ92834 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RPGRQ92834 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.78■□□□□ 0.44
RPGRQ92834 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 AC021305.1-201ENST00000520656 1514 ntBASIC17.78■□□□□ 0.44
RPGRQ92834 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.78■□□□□ 0.44
RPGRQ92834 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RPGRQ92834 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.78■□□□□ 0.44
RPGRQ92834 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
RPGRQ92834 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RPGRQ92834 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.78■□□□□ 0.44
RPGRQ92834 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.78■□□□□ 0.44
RPGRQ92834 AL139008.1-201ENST00000437894 228 ntBASIC17.78■□□□□ 0.44
RPGRQ92834 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.78■□□□□ 0.44
RPGRQ92834 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RPGRQ92834 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.78■□□□□ 0.44
RPGRQ92834 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.78■□□□□ 0.44
RPGRQ92834 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.78■□□□□ 0.44
RPGRQ92834 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RPGRQ92834 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.78■□□□□ 0.44
RPGRQ92834 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RPGRQ92834 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPGRQ92834 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RPGRQ92834 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.77■□□□□ 0.44
RPGRQ92834 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.77■□□□□ 0.44
RPGRQ92834 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 AC018442.1-201ENST00000421439 2061 ntBASIC17.77■□□□□ 0.44
RPGRQ92834 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RPGRQ92834 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
RPGRQ92834 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.77■□□□□ 0.44
RPGRQ92834 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 AC226150.1-201ENST00000544259 466 ntBASIC17.77■□□□□ 0.44
RPGRQ92834 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.77■□□□□ 0.44
RPGRQ92834 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.77■□□□□ 0.44
RPGRQ92834 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RPGRQ92834 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.77■□□□□ 0.44
RPGRQ92834 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPGRQ92834 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.77■□□□□ 0.43
RPGRQ92834 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPGRQ92834 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPGRQ92834 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
RPGRQ92834 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RPGRQ92834 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RPGRQ92834 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RPGRQ92834 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.77■□□□□ 0.43
RPGRQ92834 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RPGRQ92834 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.76■□□□□ 0.43
RPGRQ92834 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
RPGRQ92834 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPGRQ92834 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms