Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.38□□□□□ -0.43
RTN4IP1Q8WWV3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 KRT8P14-201ENST00000414254 1442 ntBASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 COL6A4P2-202ENST00000504443 2753 ntBASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 PCDHA5-203ENST00000614258 4248 ntBASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 AP001582.1-201ENST00000525856 295 ntBASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 AC005562.1-201ENST00000583030 3219 ntBASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 AC011840.2-201ENST00000563063 1520 ntBASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTN4IP1Q8WWV3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 AL731571.1-201ENST00000617058 5428 ntBASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 MEX3B-202ENST00000558133 4333 ntBASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 AC023794.5-201ENST00000564380 2157 ntBASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms