Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM4Q8WVI0 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 VENTXP1-201ENST00000569334 2716 ntBASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AL139094.1-201ENST00000405549 1188 ntBASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 KRT18P3-201ENST00000451602 1288 ntBASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AC022145.2-201ENST00000598203 171 ntBASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AC107373.2-201ENST00000607735 490 ntBASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AL603764.1-201ENST00000636452 321 ntBASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AL109936.8-201ENST00000641772 604 ntBASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 HLA-A-201ENST00000376802 1334 ntBASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AL022313.4-201ENST00000562756 2046 ntBASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 AL445250.1-201ENST00000641671 2259 ntBASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM4Q8WVI0 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 PCDHA6-201ENST00000378126 3267 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 ABCD1P2-201ENST00000429313 1601 ntBASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM4Q8WVI0 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms