Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 AP003171.2-201ENST00000528208 925 ntBASIC15.24■□□□□ 0.03
RFX6Q8HWS3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 AC078819.1-201ENST00000547454 765 ntBASIC15.24■□□□□ 0.03
RFX6Q8HWS3 AC012085.1-201ENST00000548270 765 ntBASIC15.24■□□□□ 0.03
RFX6Q8HWS3 AC138951.2-201ENST00000623455 1161 ntBASIC15.24■□□□□ 0.03
RFX6Q8HWS3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 DMBT1P1-203ENST00000636837 4628 ntBASIC15.24■□□□□ 0.03
RFX6Q8HWS3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFX6Q8HWS3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 IGHV3-72-202ENST00000621503 303 ntBASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AL358472.5-202ENST00000641448 1267 ntBASIC15.23■□□□□ 0.03
RFX6Q8HWS3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 CICP4-201ENST00000447359 2812 ntBASIC15.23■□□□□ 0.03
RFX6Q8HWS3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 BEND3P1-201ENST00000421591 1944 ntBASIC15.23■□□□□ 0.03
RFX6Q8HWS3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AL359881.3-201ENST00000602640 1721 ntBASIC15.23■□□□□ 0.03
RFX6Q8HWS3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RFX6Q8HWS3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 TCAM1P-207ENST00000485295 1537 ntBASIC15.22■□□□□ 0.03
RFX6Q8HWS3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms