Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB11FIP4Q86YS3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AC152010.1-201ENST00000415779 2006 ntBASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AC007274.1-201ENST00000439805 662 ntBASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 Z93015.1-201ENST00000451718 390 ntBASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 RNA5SP412-201ENST00000516234 123 ntBASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AC132192.2-201ENST00000596206 1147 ntBASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 TMBIM7P-202ENST00000641474 1516 ntBASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 AL928921.2-201ENST00000641325 2442 ntBASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB11FIP4Q86YS3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 DUX4L46-201ENST00000566845 751 ntBASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 AC015818.8-201ENST00000587907 1519 ntBASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB11FIP4Q86YS3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB11FIP4Q86YS3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
RAB11FIP4Q86YS3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB11FIP4Q86YS3 AC079178.1-201ENST00000420915 656 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms