Protein–RNA interactions for Protein: Q7Z4N2

TRPM1, Transient receptor potential cation channel subfamily M member 1, humanhuman

Predictions only

Length 1,603 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1Q7Z4N2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRPM1Q7Z4N2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRPM1Q7Z4N2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRPM1Q7Z4N2 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19.97■□□□□ 0.79
TRPM1Q7Z4N2 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRPM1Q7Z4N2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 AL590824.1-201ENST00000403828 1349 ntBASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 GOLGA8EP-201ENST00000530246 1959 ntBASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 NUDT4P2-201ENST00000578341 546 ntBASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 AP001184.1-201ENST00000637936 376 ntBASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRPM1Q7Z4N2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.79
TRPM1Q7Z4N2 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 RN7SL8P-201ENST00000461771 266 ntBASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 AC025186.1-201ENST00000478174 870 ntBASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 AC087392.5-201ENST00000612517 489 ntBASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 AC090502.4-201ENST00000551714 1386 ntBASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 FMO6P-201ENST00000236166 1620 ntBASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRPM1Q7Z4N2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 AL627389.1-201ENST00000413508 1182 ntBASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 AK2P2-201ENST00000439142 405 ntBASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 RNA5SP417-201ENST00000516459 108 ntBASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 AL161773.1-201ENST00000624845 863 ntBASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 PDXDC2P-206ENST00000534700 1315 ntBASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 CD81-209ENST00000492627 886 ntTSL 3 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 DNM1P30-201ENST00000563586 452 ntBASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRPM1Q7Z4N2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms