Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 RPS2P28-201ENST00000314255 741 ntBASIC11.08□□□□□ -0.64
MRPL54Q6P161 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 AC068137.2-201ENST00000605408 478 ntBASIC11.08□□□□□ -0.64
MRPL54Q6P161 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 AC093458.2-201ENST00000623150 629 ntBASIC11.08□□□□□ -0.64
MRPL54Q6P161 AC004877.2-201ENST00000623941 599 ntBASIC11.08□□□□□ -0.64
MRPL54Q6P161 AC027369.3-201ENST00000530465 3707 ntBASIC11.08□□□□□ -0.64
MRPL54Q6P161 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 AC102953.2-201ENST00000609755 3026 ntBASIC11.08□□□□□ -0.64
MRPL54Q6P161 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 DLX4-206ENST00000611342 1662 ntBASIC11.08□□□□□ -0.64
MRPL54Q6P161 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL54Q6P161 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL54Q6P161 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 POM121L14P-201ENST00000406100 1558 ntBASIC11.07□□□□□ -0.64
MRPL54Q6P161 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 FO393414.2-201ENST00000405153 598 ntBASIC11.07□□□□□ -0.64
MRPL54Q6P161 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms