Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CREB3L3Q68CJ9 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CREB3L3Q68CJ9 AL359881.3-201ENST00000602640 1721 ntBASIC17.32■□□□□ 0.36
CREB3L3Q68CJ9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CREB3L3Q68CJ9 AL157996.1-201ENST00000624684 2299 ntBASIC17.32■□□□□ 0.36
CREB3L3Q68CJ9 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CREB3L3Q68CJ9 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CREB3L3Q68CJ9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CREB3L3Q68CJ9 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CREB3L3Q68CJ9 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CREB3L3Q68CJ9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 BNIP3P42-201ENST00000454982 569 ntBASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 IGHV3-71-201ENST00000523324 359 ntBASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 AC100827.2-201ENST00000563214 1194 ntBASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 BNIP3P29-201ENST00000598302 571 ntBASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 AC017083.2-201ENST00000608069 979 ntBASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 AC011447.5-201ENST00000616168 564 ntBASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.31■□□□□ 0.36
CREB3L3Q68CJ9 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 ST13P19-201ENST00000442505 1124 ntBASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 RBM8B-201ENST00000555532 525 ntBASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 AC005962.1-201ENST00000584100 773 ntBASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 MIR6805-201ENST00000615055 62 ntBASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 AC010327.5-201ENST00000586923 3061 ntBASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 AC015818.8-201ENST00000587907 1519 ntBASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CREB3L3Q68CJ9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms