Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 OR2W2P-201ENST00000406313 909 ntBASIC17.97■□□□□ 0.47
RC3H1Q5TC82 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 AP000244.1-201ENST00000424582 201 ntBASIC17.97■□□□□ 0.47
RC3H1Q5TC82 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 GOLGA2P8-201ENST00000505201 779 ntBASIC17.97■□□□□ 0.47
RC3H1Q5TC82 AC087203.1-201ENST00000532111 1181 ntBASIC17.97■□□□□ 0.47
RC3H1Q5TC82 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 HNRNPA1P5-201ENST00000558213 966 ntBASIC17.97■□□□□ 0.47
RC3H1Q5TC82 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 AC132825.4-202ENST00000578792 434 ntBASIC17.97■□□□□ 0.47
RC3H1Q5TC82 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 AC117503.4-201ENST00000623229 1418 ntBASIC17.97■□□□□ 0.47
RC3H1Q5TC82 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RC3H1Q5TC82 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 LINC00554-201ENST00000564841 3011 ntBASIC17.96■□□□□ 0.47
RC3H1Q5TC82 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 AC091951.1-201ENST00000512854 2465 ntBASIC17.96■□□□□ 0.47
RC3H1Q5TC82 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 FKBP4P8-201ENST00000610931 1369 ntBASIC17.96■□□□□ 0.47
RC3H1Q5TC82 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 KRT18P15-201ENST00000458108 1291 ntBASIC17.96■□□□□ 0.47
RC3H1Q5TC82 AC093300.1-201ENST00000510368 1201 ntBASIC17.96■□□□□ 0.47
RC3H1Q5TC82 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 KNOP1P1-201ENST00000542108 989 ntBASIC17.96■□□□□ 0.47
RC3H1Q5TC82 AC023968.2-201ENST00000560593 1049 ntBASIC17.96■□□□□ 0.47
RC3H1Q5TC82 MIR5001-201ENST00000580185 100 ntBASIC17.96■□□□□ 0.47
RC3H1Q5TC82 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 AC073869.4-201ENST00000620841 800 ntBASIC17.96■□□□□ 0.47
RC3H1Q5TC82 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 PLS3-210ENST00000626746 216 ntTSL 4 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.96■□□□□ 0.47
RC3H1Q5TC82 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RC3H1Q5TC82 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.96■□□□□ 0.46
RC3H1Q5TC82 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 CICP6-201ENST00000457191 2729 ntBASIC17.95■□□□□ 0.46
RC3H1Q5TC82 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 GEMIN8P4-201ENST00000380526 729 ntBASIC17.95■□□□□ 0.46
RC3H1Q5TC82 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RC3H1Q5TC82 RPL3P2-204ENST00000413027 1203 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms