Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
EFNB1P98172 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.02□□□□□ -0.33
EFNB1P98172 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.02□□□□□ -0.33
EFNB1P98172 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.02□□□□□ -0.33
EFNB1P98172 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.02□□□□□ -0.33
EFNB1P98172 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.02□□□□□ -0.33
EFNB1P98172 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.02□□□□□ -0.33
EFNB1P98172 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 AC009486.1-201ENST00000569860 813 ntBASIC13.02□□□□□ -0.33
EFNB1P98172 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.02□□□□□ -0.33
EFNB1P98172 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.02□□□□□ -0.33
EFNB1P98172 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 KRT18P28-201ENST00000453838 1332 ntBASIC13.02□□□□□ -0.33
EFNB1P98172 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.02□□□□□ -0.33
EFNB1P98172 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 AC005562.1-201ENST00000583030 3219 ntBASIC13.02□□□□□ -0.33
EFNB1P98172 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.02□□□□□ -0.33
EFNB1P98172 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
EFNB1P98172 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
EFNB1P98172 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
EFNB1P98172 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.02□□□□□ -0.33
EFNB1P98172 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.02□□□□□ -0.33
EFNB1P98172 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
EFNB1P98172 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
EFNB1P98172 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNB1P98172 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
EFNB1P98172 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 AL365181.3-201ENST00000605886 3222 ntBASIC13.01□□□□□ -0.33
EFNB1P98172 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
EFNB1P98172 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
EFNB1P98172 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
EFNB1P98172 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
EFNB1P98172 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.01□□□□□ -0.33
EFNB1P98172 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 ELK1P1-201ENST00000485699 580 ntBASIC13.01□□□□□ -0.33
EFNB1P98172 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
EFNB1P98172 AC068587.3-201ENST00000526613 355 ntBASIC13.01□□□□□ -0.33
EFNB1P98172 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.01□□□□□ -0.33
EFNB1P98172 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.01□□□□□ -0.33
EFNB1P98172 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
EFNB1P98172 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.01□□□□□ -0.33
EFNB1P98172 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
EFNB1P98172 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
EFNB1P98172 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNB1P98172 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
EFNB1P98172 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNB1P98172 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13□□□□□ -0.33
EFNB1P98172 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13□□□□□ -0.33
EFNB1P98172 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNB1P98172 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
EFNB1P98172 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms