Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MIR1908-201ENST00000410394 80 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.07□□□□□ -0.32
H3F3AP84243 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.07□□□□□ -0.32
H3F3AP84243 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.07□□□□□ -0.32
H3F3AP84243 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.07□□□□□ -0.32
H3F3AP84243 TUBB8P8-201ENST00000458717 1058 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 FAM8A2P-201ENST00000528813 1142 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.07□□□□□ -0.32
H3F3AP84243 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.07□□□□□ -0.32
H3F3AP84243 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
H3F3AP84243 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 AC009884.2-201ENST00000603110 324 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 AC005695.3-201ENST00000614522 232 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 AP000346.4-201ENST00000614827 381 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 AL023803.2-201ENST00000620080 638 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.07□□□□□ -0.32
H3F3AP84243 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H3F3AP84243 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
H3F3AP84243 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.07□□□□□ -0.32
H3F3AP84243 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.07□□□□□ -0.32
H3F3AP84243 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.07□□□□□ -0.32
H3F3AP84243 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 AL008718.2-201ENST00000609206 1313 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 KRT8P29-201ENST00000420409 1371 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.07□□□□□ -0.32
H3F3AP84243 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
H3F3AP84243 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.06□□□□□ -0.32
H3F3AP84243 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.06□□□□□ -0.32
H3F3AP84243 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.06□□□□□ -0.32
H3F3AP84243 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
H3F3AP84243 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.06□□□□□ -0.32
H3F3AP84243 AC005730.2-201ENST00000564549 1184 ntBASIC13.06□□□□□ -0.32
H3F3AP84243 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 AC104982.3-201ENST00000581995 514 ntBASIC13.06□□□□□ -0.32
H3F3AP84243 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.06□□□□□ -0.32
H3F3AP84243 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.06□□□□□ -0.32
H3F3AP84243 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 AC011498.7-201ENST00000624986 2027 ntBASIC13.06□□□□□ -0.32
H3F3AP84243 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 AL137784.3-201ENST00000623858 2288 ntBASIC13.06□□□□□ -0.32
H3F3AP84243 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 AC064801.2-201ENST00000625052 1303 ntBASIC13.06□□□□□ -0.32
H3F3AP84243 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.06□□□□□ -0.32
H3F3AP84243 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.06□□□□□ -0.32
H3F3AP84243 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.06□□□□□ -0.32
H3F3AP84243 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.06□□□□□ -0.32
H3F3AP84243 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H3F3AP84243 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.05□□□□□ -0.32
H3F3AP84243 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
H3F3AP84243 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H3F3AP84243 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms