Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC42P60953 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CDC42P60953 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CDC42P60953 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CDC42P60953 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CDC42P60953 PTPRVP-205ENST00000641549 5067 ntBASIC13.42□□□□□ -0.26
CDC42P60953 AC004241.5-201ENST00000623870 2448 ntBASIC13.42□□□□□ -0.26
CDC42P60953 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42P60953 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CDC42P60953 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42P60953 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC42P60953 RPL13AP25-201ENST00000484130 612 ntBASIC13.42□□□□□ -0.26
CDC42P60953 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.42□□□□□ -0.26
CDC42P60953 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42P60953 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CDC42P60953 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CDC42P60953 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.42□□□□□ -0.26
CDC42P60953 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42P60953 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC42P60953 AL049840.4-201ENST00000602422 811 ntBASIC13.42□□□□□ -0.26
CDC42P60953 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC42P60953 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC42P60953 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDC42P60953 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDC42P60953 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDC42P60953 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CDC42P60953 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC42P60953 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CDC42P60953 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
CDC42P60953 CSPG4P11-201ENST00000560634 4910 ntBASIC13.41□□□□□ -0.26
CDC42P60953 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CDC42P60953 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.41□□□□□ -0.26
CDC42P60953 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CDC42P60953 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CDC42P60953 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CDC42P60953 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CDC42P60953 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.41□□□□□ -0.26
CDC42P60953 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CDC42P60953 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.41□□□□□ -0.26
CDC42P60953 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.41□□□□□ -0.26
CDC42P60953 UPF3AP3-201ENST00000420996 769 ntBASIC13.41□□□□□ -0.26
CDC42P60953 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.41□□□□□ -0.26
CDC42P60953 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
CDC42P60953 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.41□□□□□ -0.26
CDC42P60953 AP000347.1-202ENST00000435868 847 ntBASIC13.41□□□□□ -0.26
CDC42P60953 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.41□□□□□ -0.26
CDC42P60953 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.41□□□□□ -0.26
CDC42P60953 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.41□□□□□ -0.26
CDC42P60953 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 AC092865.5-201ENST00000545435 363 ntBASIC13.41□□□□□ -0.26
CDC42P60953 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC42P60953 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.41□□□□□ -0.26
CDC42P60953 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.41□□□□□ -0.26
CDC42P60953 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
CDC42P60953 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms