Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
AP3S2P59780 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.6□□□□□ -0.39
AP3S2P59780 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.6□□□□□ -0.39
AP3S2P59780 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S2P59780 AL445209.1-201ENST00000607269 3491 ntBASIC12.6□□□□□ -0.39
AP3S2P59780 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.6□□□□□ -0.39
AP3S2P59780 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP3S2P59780 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
AP3S2P59780 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.59□□□□□ -0.39
AP3S2P59780 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.59□□□□□ -0.39
AP3S2P59780 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.59□□□□□ -0.39
AP3S2P59780 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 Z98257.2-202ENST00000641138 1548 ntBASIC12.59□□□□□ -0.39
AP3S2P59780 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.59□□□□□ -0.39
AP3S2P59780 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
AP3S2P59780 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AP3S2P59780 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
AP3S2P59780 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.59□□□□□ -0.39
AP3S2P59780 TLE1P1-201ENST00000422965 589 ntBASIC12.59□□□□□ -0.39
AP3S2P59780 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.59□□□□□ -0.39
AP3S2P59780 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.59□□□□□ -0.39
AP3S2P59780 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
AP3S2P59780 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.59□□□□□ -0.39
AP3S2P59780 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.59□□□□□ -0.39
AP3S2P59780 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.59□□□□□ -0.39
AP3S2P59780 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
AP3S2P59780 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
AP3S2P59780 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.59□□□□□ -0.39
AP3S2P59780 AC018529.1-201ENST00000613063 361 ntBASIC12.59□□□□□ -0.39
AP3S2P59780 AC091812.2-201ENST00000619081 385 ntBASIC12.59□□□□□ -0.39
AP3S2P59780 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.59□□□□□ -0.39
AP3S2P59780 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.59□□□□□ -0.39
AP3S2P59780 LINC00628-201ENST00000628516 1289 ntBASIC12.59□□□□□ -0.39
AP3S2P59780 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.59□□□□□ -0.39
AP3S2P59780 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.59□□□□□ -0.39
AP3S2P59780 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
AP3S2P59780 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.59□□□□□ -0.39
AP3S2P59780 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.59□□□□□ -0.39
AP3S2P59780 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AP3S2P59780 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP3S2P59780 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
AP3S2P59780 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.58□□□□□ -0.39
AP3S2P59780 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
AP3S2P59780 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.58□□□□□ -0.39
AP3S2P59780 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
AP3S2P59780 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
AP3S2P59780 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.58□□□□□ -0.4
AP3S2P59780 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
AP3S2P59780 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.58□□□□□ -0.4
AP3S2P59780 AC025048.3-201ENST00000590609 569 ntBASIC12.58□□□□□ -0.4
AP3S2P59780 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 AL049840.3-201ENST00000602669 611 ntBASIC12.58□□□□□ -0.4
AP3S2P59780 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.58□□□□□ -0.4
AP3S2P59780 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
AP3S2P59780 AC005702.4-201ENST00000618393 416 ntBASIC12.58□□□□□ -0.4
AP3S2P59780 AF228730.6-201ENST00000641497 218 ntBASIC12.58□□□□□ -0.4
AP3S2P59780 AC084121.3-201ENST00000641716 218 ntBASIC12.58□□□□□ -0.4
AP3S2P59780 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP3S2P59780 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms