Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.65□□□□□ -0.22
PER3P56645 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PER3P56645 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.65□□□□□ -0.22
PER3P56645 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.65□□□□□ -0.22
PER3P56645 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PER3P56645 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.65□□□□□ -0.22
PER3P56645 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.65□□□□□ -0.22
PER3P56645 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.65□□□□□ -0.22
PER3P56645 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.65□□□□□ -0.22
PER3P56645 AC106794.1-201ENST00000506935 792 ntBASIC13.65□□□□□ -0.22
PER3P56645 AC005740.2-201ENST00000511085 419 ntBASIC13.65□□□□□ -0.22
PER3P56645 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.65□□□□□ -0.22
PER3P56645 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
PER3P56645 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.65□□□□□ -0.22
PER3P56645 CHMP4BP1-201ENST00000556017 588 ntBASIC13.65□□□□□ -0.22
PER3P56645 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.65□□□□□ -0.22
PER3P56645 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.65□□□□□ -0.22
PER3P56645 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.65□□□□□ -0.22
PER3P56645 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.65□□□□□ -0.22
PER3P56645 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.65□□□□□ -0.22
PER3P56645 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PER3P56645 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.65□□□□□ -0.22
PER3P56645 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.65□□□□□ -0.22
PER3P56645 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PER3P56645 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.65□□□□□ -0.22
PER3P56645 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PER3P56645 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
PER3P56645 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
PER3P56645 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
PER3P56645 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
PER3P56645 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.64□□□□□ -0.23
PER3P56645 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.64□□□□□ -0.23
PER3P56645 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PER3P56645 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
PER3P56645 AL928921.2-201ENST00000641325 2442 ntBASIC13.64□□□□□ -0.23
PER3P56645 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PER3P56645 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PER3P56645 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.64□□□□□ -0.23
PER3P56645 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 RPL5P21-201ENST00000404620 815 ntBASIC13.64□□□□□ -0.23
PER3P56645 AC016700.1-201ENST00000429424 312 ntBASIC13.64□□□□□ -0.23
PER3P56645 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.64□□□□□ -0.23
PER3P56645 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
PER3P56645 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
PER3P56645 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.64□□□□□ -0.23
PER3P56645 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.64□□□□□ -0.23
PER3P56645 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
PER3P56645 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.64□□□□□ -0.23
PER3P56645 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
PER3P56645 ENPP7P14-201ENST00000621765 1040 ntBASIC13.64□□□□□ -0.23
PER3P56645 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 AC140479.7-201ENST00000636301 2332 ntBASIC13.64□□□□□ -0.23
PER3P56645 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.64□□□□□ -0.23
PER3P56645 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
PER3P56645 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
PER3P56645 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PER3P56645 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PER3P56645 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PER3P56645 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PER3P56645 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PER3P56645 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.63□□□□□ -0.23
PER3P56645 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms