Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
GFRA1P56159 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 RN7SL832P-201ENST00000607781 1756 ntBASIC13.03□□□□□ -0.32
GFRA1P56159 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
GFRA1P56159 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.03□□□□□ -0.32
GFRA1P56159 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.03□□□□□ -0.32
GFRA1P56159 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 PDIA3P2-201ENST00000428073 158 ntBASIC13.03□□□□□ -0.32
GFRA1P56159 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 NUP210P1-202ENST00000504322 710 ntBASIC13.03□□□□□ -0.32
GFRA1P56159 AC245884.6-201ENST00000515672 1067 ntBASIC13.03□□□□□ -0.32
GFRA1P56159 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.03□□□□□ -0.32
GFRA1P56159 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
GFRA1P56159 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.03□□□□□ -0.32
GFRA1P56159 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
GFRA1P56159 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 AC011498.7-201ENST00000624986 2027 ntBASIC13.03□□□□□ -0.32
GFRA1P56159 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 LAP3P2-201ENST00000454686 1454 ntBASIC13.03□□□□□ -0.32
GFRA1P56159 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 AC232323.1-201ENST00000540724 2099 ntBASIC13.03□□□□□ -0.32
GFRA1P56159 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.03□□□□□ -0.32
GFRA1P56159 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.03□□□□□ -0.32
GFRA1P56159 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.02□□□□□ -0.32
GFRA1P56159 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.02□□□□□ -0.32
GFRA1P56159 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
GFRA1P56159 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
GFRA1P56159 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.02□□□□□ -0.32
GFRA1P56159 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
GFRA1P56159 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
GFRA1P56159 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
GFRA1P56159 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GFRA1P56159 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.02□□□□□ -0.32
GFRA1P56159 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.02□□□□□ -0.32
GFRA1P56159 INTS4P1-203ENST00000641008 3683 ntBASIC13.02□□□□□ -0.33
GFRA1P56159 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
GFRA1P56159 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.02□□□□□ -0.33
GFRA1P56159 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.02□□□□□ -0.33
GFRA1P56159 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.02□□□□□ -0.33
GFRA1P56159 AC073150.1-201ENST00000450406 1084 ntBASIC13.02□□□□□ -0.33
GFRA1P56159 AL353637.1-201ENST00000451571 732 ntBASIC13.02□□□□□ -0.33
GFRA1P56159 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
GFRA1P56159 POU5F1P2-201ENST00000521750 823 ntBASIC13.02□□□□□ -0.33
GFRA1P56159 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.02□□□□□ -0.33
GFRA1P56159 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
GFRA1P56159 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.02□□□□□ -0.33
GFRA1P56159 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.02□□□□□ -0.33
GFRA1P56159 AF254983.2-201ENST00000612331 135 ntBASIC13.02□□□□□ -0.33
GFRA1P56159 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
GFRA1P56159 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.02□□□□□ -0.33
GFRA1P56159 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.02□□□□□ -0.33
GFRA1P56159 LINC00552-201ENST00000625151 2579 ntBASIC13.02□□□□□ -0.33
GFRA1P56159 AP002353.1-201ENST00000528257 1599 ntBASIC13.02□□□□□ -0.33
GFRA1P56159 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GFRA1P56159 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.02□□□□□ -0.33
GFRA1P56159 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms