Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXG1P55316 AL132994.2-201ENST00000603120 687 ntBASIC12.77□□□□□ -0.37
FOXG1P55316 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
FOXG1P55316 AL157813.1-201ENST00000612996 587 ntBASIC12.77□□□□□ -0.37
FOXG1P55316 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.77□□□□□ -0.37
FOXG1P55316 AL139099.5-201ENST00000635274 300 ntBASIC12.77□□□□□ -0.37
FOXG1P55316 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXG1P55316 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXG1P55316 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
FOXG1P55316 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.77□□□□□ -0.37
FOXG1P55316 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXG1P55316 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
FOXG1P55316 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXG1P55316 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
FOXG1P55316 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXG1P55316 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 AC090505.1-201ENST00000430515 1834 ntBASIC12.76□□□□□ -0.37
FOXG1P55316 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
FOXG1P55316 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
FOXG1P55316 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.76□□□□□ -0.37
FOXG1P55316 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXG1P55316 AC078875.1-201ENST00000431907 724 ntBASIC12.76□□□□□ -0.37
FOXG1P55316 XBP1P1-201ENST00000436573 652 ntBASIC12.76□□□□□ -0.37
FOXG1P55316 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXG1P55316 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.76□□□□□ -0.37
FOXG1P55316 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.76□□□□□ -0.37
FOXG1P55316 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXG1P55316 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXG1P55316 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.76□□□□□ -0.37
FOXG1P55316 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
FOXG1P55316 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.76□□□□□ -0.37
FOXG1P55316 AL136295.7-201ENST00000619226 1200 ntBASIC12.76□□□□□ -0.37
FOXG1P55316 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 CICP16-201ENST00000502609 2813 ntBASIC12.76□□□□□ -0.37
FOXG1P55316 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXG1P55316 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXG1P55316 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXG1P55316 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
FOXG1P55316 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXG1P55316 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.76□□□□□ -0.37
FOXG1P55316 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.76□□□□□ -0.37
FOXG1P55316 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
FOXG1P55316 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXG1P55316 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms