Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NKX2-5P52952 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 LSINCT5-201ENST00000626215 2647 ntBASIC12.39□□□□□ -0.43
NKX2-5P52952 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 AC005521.1-201ENST00000393351 872 ntBASIC12.39□□□□□ -0.43
NKX2-5P52952 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.39□□□□□ -0.43
NKX2-5P52952 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 MIR4497-201ENST00000583208 89 ntBASIC12.39□□□□□ -0.43
NKX2-5P52952 MIR4515-201ENST00000584082 81 ntBASIC12.39□□□□□ -0.43
NKX2-5P52952 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 AL022326.1-202ENST00000641533 845 ntBASIC12.39□□□□□ -0.43
NKX2-5P52952 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 SMCR5-201ENST00000543475 2844 ntBASIC12.39□□□□□ -0.43
NKX2-5P52952 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.39□□□□□ -0.43
NKX2-5P52952 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 AC026797.1-201ENST00000624837 2869 ntBASIC12.39□□□□□ -0.43
NKX2-5P52952 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
NKX2-5P52952 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NKX2-5P52952 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NKX2-5P52952 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NKX2-5P52952 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-5P52952 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-5P52952 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NKX2-5P52952 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
NKX2-5P52952 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-5P52952 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NKX2-5P52952 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.38□□□□□ -0.43
NKX2-5P52952 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.38□□□□□ -0.43
NKX2-5P52952 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.38□□□□□ -0.43
NKX2-5P52952 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
NKX2-5P52952 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX2-5P52952 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX2-5P52952 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX2-5P52952 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX2-5P52952 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-5P52952 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-5P52952 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-5P52952 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-5P52952 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.37□□□□□ -0.43
NKX2-5P52952 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-5P52952 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-5P52952 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.37□□□□□ -0.43
NKX2-5P52952 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-5P52952 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-5P52952 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms