Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN4P51793 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 AC092638.2-201ENST00000441105 947 ntBASIC15.26■□□□□ 0.03
CLCN4P51793 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.26■□□□□ 0.03
CLCN4P51793 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCN4P51793 AC027237.1-201ENST00000560942 655 ntBASIC15.26■□□□□ 0.03
CLCN4P51793 RN7SL470P-201ENST00000583069 259 ntBASIC15.26■□□□□ 0.03
CLCN4P51793 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.26■□□□□ 0.03
CLCN4P51793 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN4P51793 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN4P51793 AC127024.7-201ENST00000625101 200 ntBASIC15.26■□□□□ 0.03
CLCN4P51793 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN4P51793 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN4P51793 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
CLCN4P51793 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCN4P51793 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCN4P51793 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCN4P51793 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLCN4P51793 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CLCN4P51793 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLCN4P51793 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CLCN4P51793 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN4P51793 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN4P51793 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN4P51793 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CLCN4P51793 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 AC073869.2-201ENST00000417338 1026 ntBASIC15.25■□□□□ 0.03
CLCN4P51793 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 AC092580.1-201ENST00000433998 658 ntBASIC15.25■□□□□ 0.03
CLCN4P51793 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.25■□□□□ 0.03
CLCN4P51793 AC138701.2-201ENST00000553634 226 ntBASIC15.25■□□□□ 0.03
CLCN4P51793 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.25■□□□□ 0.03
CLCN4P51793 AC005041.3-201ENST00000606287 649 ntBASIC15.25■□□□□ 0.03
CLCN4P51793 MIR6756-201ENST00000616240 63 ntBASIC15.25■□□□□ 0.03
CLCN4P51793 AL591471.1-201ENST00000621855 229 ntBASIC15.25■□□□□ 0.03
CLCN4P51793 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
CLCN4P51793 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLCN4P51793 IL9RP3-201ENST00000442856 1674 ntBASIC15.25■□□□□ 0.03
CLCN4P51793 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLCN4P51793 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CLCN4P51793 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN4P51793 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN4P51793 AC015688.4-201ENST00000580780 1647 ntBASIC15.25■□□□□ 0.03
CLCN4P51793 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCN4P51793 LINC00528-201ENST00000600723 2160 ntBASIC15.24■□□□□ 0.03
CLCN4P51793 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN4P51793 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 GUSBP10-201ENST00000417412 665 ntBASIC15.24■□□□□ 0.03
CLCN4P51793 AL512306.1-201ENST00000432698 848 ntBASIC15.24■□□□□ 0.03
CLCN4P51793 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCN4P51793 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.24■□□□□ 0.03
CLCN4P51793 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN4P51793 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.24■□□□□ 0.03
CLCN4P51793 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 CR383656.3-201ENST00000551315 183 ntBASIC15.24■□□□□ 0.03
CLCN4P51793 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN4P51793 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.24■□□□□ 0.03
CLCN4P51793 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN4P51793 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.24■□□□□ 0.03
CLCN4P51793 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CLCN4P51793 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN4P51793 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CLCN4P51793 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CLCN4P51793 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN4P51793 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CLCN4P51793 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLCN4P51793 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms