Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.37□□□□□ -0.27
SSR4P51571 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.37□□□□□ -0.27
SSR4P51571 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.37□□□□□ -0.27
SSR4P51571 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.37□□□□□ -0.27
SSR4P51571 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.37□□□□□ -0.27
SSR4P51571 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.37□□□□□ -0.27
SSR4P51571 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.37□□□□□ -0.27
SSR4P51571 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.37□□□□□ -0.27
SSR4P51571 ST13P19-201ENST00000442505 1124 ntBASIC13.37□□□□□ -0.27
SSR4P51571 TPT1P11-201ENST00000458482 498 ntBASIC13.37□□□□□ -0.27
SSR4P51571 POU5F1P2-201ENST00000521750 823 ntBASIC13.37□□□□□ -0.27
SSR4P51571 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.37□□□□□ -0.27
SSR4P51571 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SSR4P51571 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.37□□□□□ -0.27
SSR4P51571 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.37□□□□□ -0.27
SSR4P51571 MIR6074-201ENST00000612054 107 ntBASIC13.37□□□□□ -0.27
SSR4P51571 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
SSR4P51571 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.37□□□□□ -0.27
SSR4P51571 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.37□□□□□ -0.27
SSR4P51571 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SSR4P51571 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSR4P51571 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSR4P51571 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.37□□□□□ -0.27
SSR4P51571 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.36□□□□□ -0.27
SSR4P51571 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.36□□□□□ -0.27
SSR4P51571 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.36□□□□□ -0.27
SSR4P51571 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.36□□□□□ -0.27
SSR4P51571 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.36□□□□□ -0.27
SSR4P51571 TSPY25P-201ENST00000429463 745 ntBASIC13.36□□□□□ -0.27
SSR4P51571 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.36□□□□□ -0.27
SSR4P51571 AL353637.1-201ENST00000451571 732 ntBASIC13.36□□□□□ -0.27
SSR4P51571 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.36□□□□□ -0.27
SSR4P51571 UPF3AP2-201ENST00000457924 1132 ntBASIC13.36□□□□□ -0.27
SSR4P51571 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.36□□□□□ -0.27
SSR4P51571 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 NUP210P1-202ENST00000504322 710 ntBASIC13.36□□□□□ -0.27
SSR4P51571 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.36□□□□□ -0.27
SSR4P51571 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.36□□□□□ -0.27
SSR4P51571 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.36□□□□□ -0.27
SSR4P51571 MIR3188-201ENST00000583494 85 ntBASIC13.36□□□□□ -0.27
SSR4P51571 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.36□□□□□ -0.27
SSR4P51571 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.36□□□□□ -0.27
SSR4P51571 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.36□□□□□ -0.27
SSR4P51571 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.36□□□□□ -0.27
SSR4P51571 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.36□□□□□ -0.27
SSR4P51571 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
SSR4P51571 AC215219.1-201ENST00000400706 1817 ntBASIC13.36□□□□□ -0.27
SSR4P51571 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SSR4P51571 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SSR4P51571 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSR4P51571 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms