Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 AC244452.3-201ENST00000636814 210 ntBASIC14.09□□□□□ -0.15
RAB28P51157 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB28P51157 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB28P51157 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB28P51157 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB28P51157 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB28P51157 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAB28P51157 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB28P51157 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB28P51157 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB28P51157 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB28P51157 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RAB28P51157 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
RAB28P51157 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RAB28P51157 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB28P51157 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB28P51157 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
RAB28P51157 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAB28P51157 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB28P51157 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
RAB28P51157 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RAB28P51157 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.08□□□□□ -0.16
RAB28P51157 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RAB28P51157 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB28P51157 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB28P51157 AC078875.1-201ENST00000431907 724 ntBASIC14.08□□□□□ -0.16
RAB28P51157 ST13P19-201ENST00000442505 1124 ntBASIC14.08□□□□□ -0.16
RAB28P51157 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB28P51157 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB28P51157 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB28P51157 AC099548.2-209ENST00000480264 625 ntBASIC14.08□□□□□ -0.16
RAB28P51157 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.08□□□□□ -0.16
RAB28P51157 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB28P51157 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB28P51157 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB28P51157 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB28P51157 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB28P51157 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB28P51157 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB28P51157 AHCYP4-201ENST00000419201 1315 ntBASIC14.08□□□□□ -0.16
RAB28P51157 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RAB28P51157 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB28P51157 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB28P51157 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RAB28P51157 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RAB28P51157 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RAB28P51157 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB28P51157 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAB28P51157 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB28P51157 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RAB28P51157 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
RAB28P51157 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RAB28P51157 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB28P51157 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB28P51157 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB28P51157 KRT18P36-201ENST00000411618 1276 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms