Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.09■□□□□ 0.17
RFC5P40937 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.09■□□□□ 0.17
RFC5P40937 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.09■□□□□ 0.17
RFC5P40937 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.09■□□□□ 0.17
RFC5P40937 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.09■□□□□ 0.17
RFC5P40937 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RFC5P40937 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
RFC5P40937 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
RFC5P40937 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.08■□□□□ 0.17
RFC5P40937 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFC5P40937 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.08■□□□□ 0.17
RFC5P40937 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFC5P40937 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFC5P40937 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RFC5P40937 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFC5P40937 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.08■□□□□ 0.17
RFC5P40937 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RFC5P40937 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFC5P40937 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFC5P40937 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RFC5P40937 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RFC5P40937 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RFC5P40937 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.08■□□□□ 0.16
RFC5P40937 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.08■□□□□ 0.16
RFC5P40937 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.08■□□□□ 0.16
RFC5P40937 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.08■□□□□ 0.16
RFC5P40937 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.08■□□□□ 0.16
RFC5P40937 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.08■□□□□ 0.16
RFC5P40937 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.08■□□□□ 0.16
RFC5P40937 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RFC5P40937 AC091812.3-201ENST00000621362 345 ntBASIC16.08■□□□□ 0.16
RFC5P40937 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
RFC5P40937 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 AC064801.2-201ENST00000625052 1303 ntBASIC16.08■□□□□ 0.16
RFC5P40937 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RFC5P40937 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.08■□□□□ 0.16
RFC5P40937 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.08■□□□□ 0.16
RFC5P40937 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.08■□□□□ 0.16
RFC5P40937 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RFC5P40937 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFC5P40937 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RFC5P40937 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.07■□□□□ 0.16
RFC5P40937 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.07■□□□□ 0.16
RFC5P40937 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.07■□□□□ 0.16
RFC5P40937 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 TSPY25P-201ENST00000429463 745 ntBASIC16.07■□□□□ 0.16
RFC5P40937 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 AC012618.1-201ENST00000461223 412 ntBASIC16.07■□□□□ 0.16
RFC5P40937 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
RFC5P40937 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.07■□□□□ 0.16
RFC5P40937 AC021016.3-201ENST00000608367 477 ntBASIC16.07■□□□□ 0.16
RFC5P40937 AL021578.1-201ENST00000613646 709 ntBASIC16.07■□□□□ 0.16
RFC5P40937 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.07■□□□□ 0.16
RFC5P40937 AL591471.1-201ENST00000621855 229 ntBASIC16.07■□□□□ 0.16
RFC5P40937 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RFC5P40937 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC5P40937 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms