Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.64■□□□□ 0.25
COPB2P35606 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.64■□□□□ 0.25
COPB2P35606 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
COPB2P35606 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.64■□□□□ 0.25
COPB2P35606 AL512430.1-201ENST00000392575 860 ntBASIC16.64■□□□□ 0.25
COPB2P35606 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 AL627422.1-201ENST00000434104 580 ntBASIC16.64■□□□□ 0.25
COPB2P35606 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.64■□□□□ 0.25
COPB2P35606 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.64■□□□□ 0.25
COPB2P35606 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.64■□□□□ 0.25
COPB2P35606 AC079112.1-201ENST00000454972 939 ntBASIC16.64■□□□□ 0.25
COPB2P35606 FTH1P22-201ENST00000456305 520 ntBASIC16.64■□□□□ 0.25
COPB2P35606 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.64■□□□□ 0.25
COPB2P35606 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.64■□□□□ 0.25
COPB2P35606 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.64■□□□□ 0.25
COPB2P35606 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.64■□□□□ 0.25
COPB2P35606 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COPB2P35606 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.64■□□□□ 0.25
COPB2P35606 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.64■□□□□ 0.25
COPB2P35606 MARK2P16-201ENST00000605714 1723 ntBASIC16.64■□□□□ 0.25
COPB2P35606 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.64■□□□□ 0.25
COPB2P35606 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.64■□□□□ 0.25
COPB2P35606 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.64■□□□□ 0.25
COPB2P35606 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COPB2P35606 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.64■□□□□ 0.25
COPB2P35606 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.63■□□□□ 0.25
COPB2P35606 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.63■□□□□ 0.25
COPB2P35606 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COPB2P35606 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.63■□□□□ 0.25
COPB2P35606 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.63■□□□□ 0.25
COPB2P35606 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.63■□□□□ 0.25
COPB2P35606 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.63■□□□□ 0.25
COPB2P35606 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 AL009178.2-201ENST00000597278 2719 ntBASIC16.63■□□□□ 0.25
COPB2P35606 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COPB2P35606 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPB2P35606 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.63■□□□□ 0.25
COPB2P35606 AC099063.4-201ENST00000641099 1602 ntBASIC16.63■□□□□ 0.25
COPB2P35606 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.62■□□□□ 0.25
COPB2P35606 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.62■□□□□ 0.25
COPB2P35606 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
COPB2P35606 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COPB2P35606 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.62■□□□□ 0.25
COPB2P35606 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
COPB2P35606 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.62■□□□□ 0.25
COPB2P35606 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.62■□□□□ 0.25
COPB2P35606 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 NDUFS6P1-201ENST00000485187 316 ntBASIC16.62■□□□□ 0.25
COPB2P35606 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.62■□□□□ 0.25
COPB2P35606 KRT8P1-201ENST00000557533 1207 ntBASIC16.62■□□□□ 0.25
COPB2P35606 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 AC140658.4-201ENST00000561990 352 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms