Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC015910.1-201ENST00000579400 975 ntBASIC16.7■□□□□ 0.26
CLCN1P35523 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
CLCN1P35523 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.7■□□□□ 0.26
CLCN1P35523 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CLCN1P35523 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCN1P35523 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC16.7■□□□□ 0.26
CLCN1P35523 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CLCN1P35523 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 POM121L4P-202ENST00000427789 1891 ntBASIC16.69■□□□□ 0.26
CLCN1P35523 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN1P35523 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN1P35523 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.69■□□□□ 0.26
CLCN1P35523 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN1P35523 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
CLCN1P35523 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN1P35523 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.69■□□□□ 0.26
CLCN1P35523 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCN1P35523 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCN1P35523 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCN1P35523 AC009477.1-201ENST00000452936 217 ntBASIC16.69■□□□□ 0.26
CLCN1P35523 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 AC009407.1-201ENST00000568958 598 ntBASIC16.69■□□□□ 0.26
CLCN1P35523 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.69■□□□□ 0.26
CLCN1P35523 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN1P35523 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLCN1P35523 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC16.69■□□□□ 0.26
CLCN1P35523 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CLCN1P35523 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CLCN1P35523 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN1P35523 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CLCN1P35523 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN1P35523 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CLCN1P35523 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CLCN1P35523 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.68■□□□□ 0.26
CLCN1P35523 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.68■□□□□ 0.26
CLCN1P35523 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.68■□□□□ 0.26
CLCN1P35523 AC055876.3-201ENST00000431496 288 ntBASIC16.68■□□□□ 0.26
CLCN1P35523 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.68■□□□□ 0.26
CLCN1P35523 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN1P35523 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN1P35523 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.68■□□□□ 0.26
CLCN1P35523 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.68■□□□□ 0.26
CLCN1P35523 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.68■□□□□ 0.26
CLCN1P35523 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.68■□□□□ 0.26
CLCN1P35523 AC138649.4-201ENST00000612222 287 ntBASIC16.68■□□□□ 0.26
CLCN1P35523 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CLCN1P35523 AC004461.2-201ENST00000629517 803 ntBASIC16.68■□□□□ 0.26
CLCN1P35523 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN1P35523 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLCN1P35523 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLCN1P35523 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLCN1P35523 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN1P35523 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN1P35523 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN1P35523 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms