Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CKS2P33552 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
CKS2P33552 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS2P33552 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CKS2P33552 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 AC007967.2-201ENST00000432613 625 ntBASIC10.8□□□□□ -0.68
CKS2P33552 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 MTND6P24-201ENST00000440466 518 ntBASIC10.8□□□□□ -0.68
CKS2P33552 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.8□□□□□ -0.68
CKS2P33552 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 PPIE-208ENST00000470213 927 ntTSL 3 BASIC10.8□□□□□ -0.68
CKS2P33552 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 GATB-205ENST00000508611 605 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 UNC93B7-201ENST00000509439 705 ntBASIC10.8□□□□□ -0.68
CKS2P33552 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
CKS2P33552 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.8□□□□□ -0.68
CKS2P33552 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.8□□□□□ -0.68
CKS2P33552 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 AC003101.2-201ENST00000612557 442 ntBASIC10.8□□□□□ -0.68
CKS2P33552 AC018529.1-201ENST00000613063 361 ntBASIC10.8□□□□□ -0.68
CKS2P33552 AF228730.6-201ENST00000641497 218 ntBASIC10.8□□□□□ -0.68
CKS2P33552 AC084121.3-201ENST00000641716 218 ntBASIC10.8□□□□□ -0.68
CKS2P33552 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 AC011498.7-201ENST00000624986 2027 ntBASIC10.8□□□□□ -0.68
CKS2P33552 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
CKS2P33552 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CKS2P33552 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CKS2P33552 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
CKS2P33552 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
CKS2P33552 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms