Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.46□□□□□ -0.25
SHC1P29353 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.46□□□□□ -0.25
SHC1P29353 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
SHC1P29353 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.46□□□□□ -0.25
SHC1P29353 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
SHC1P29353 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.46□□□□□ -0.25
SHC1P29353 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.46□□□□□ -0.25
SHC1P29353 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.46□□□□□ -0.25
SHC1P29353 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SHC1P29353 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.46□□□□□ -0.25
SHC1P29353 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.46□□□□□ -0.25
SHC1P29353 COX5BP1-201ENST00000507622 393 ntBASIC13.46□□□□□ -0.25
SHC1P29353 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.46□□□□□ -0.25
SHC1P29353 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SHC1P29353 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.46□□□□□ -0.25
SHC1P29353 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.46□□□□□ -0.25
SHC1P29353 MIR4683-201ENST00000579659 81 ntBASIC13.46□□□□□ -0.25
SHC1P29353 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 AL008721.1-201ENST00000609964 604 ntBASIC13.46□□□□□ -0.25
SHC1P29353 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.46□□□□□ -0.25
SHC1P29353 AC008687.7-202ENST00000637404 953 ntBASIC13.46□□□□□ -0.25
SHC1P29353 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SHC1P29353 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.46□□□□□ -0.25
SHC1P29353 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.46□□□□□ -0.25
SHC1P29353 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
SHC1P29353 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHC1P29353 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SHC1P29353 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHC1P29353 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SHC1P29353 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHC1P29353 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
SHC1P29353 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHC1P29353 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SHC1P29353 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
SHC1P29353 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
SHC1P29353 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
SHC1P29353 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHC1P29353 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SHC1P29353 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.46□□□□□ -0.26
SHC1P29353 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
SHC1P29353 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.45□□□□□ -0.26
SHC1P29353 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.45□□□□□ -0.26
SHC1P29353 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SHC1P29353 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.45□□□□□ -0.26
SHC1P29353 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.45□□□□□ -0.26
SHC1P29353 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 RN7SKP175-201ENST00000408472 289 ntBASIC13.45□□□□□ -0.26
SHC1P29353 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.45□□□□□ -0.26
SHC1P29353 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.45□□□□□ -0.26
SHC1P29353 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.45□□□□□ -0.26
SHC1P29353 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.45□□□□□ -0.26
SHC1P29353 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.45□□□□□ -0.26
SHC1P29353 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.45□□□□□ -0.26
SHC1P29353 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
SHC1P29353 C2orf69P2-201ENST00000562032 1123 ntBASIC13.45□□□□□ -0.26
SHC1P29353 AP006547.1-201ENST00000563435 692 ntBASIC13.45□□□□□ -0.26
SHC1P29353 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.45□□□□□ -0.26
SHC1P29353 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.45□□□□□ -0.26
SHC1P29353 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.45□□□□□ -0.26
SHC1P29353 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.45□□□□□ -0.26
SHC1P29353 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.45□□□□□ -0.26
SHC1P29353 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
SHC1P29353 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHC1P29353 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms