Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
VAMP1P23763 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.45□□□□□ -0.42
VAMP1P23763 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VAMP1P23763 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
VAMP1P23763 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VAMP1P23763 TNRC18P1-201ENST00000502875 3650 ntBASIC12.44□□□□□ -0.42
VAMP1P23763 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VAMP1P23763 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.44□□□□□ -0.42
VAMP1P23763 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.44□□□□□ -0.42
VAMP1P23763 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
VAMP1P23763 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.44□□□□□ -0.42
VAMP1P23763 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
VAMP1P23763 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC12.44□□□□□ -0.42
VAMP1P23763 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.44□□□□□ -0.42
VAMP1P23763 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 AC006064.1-201ENST00000499202 560 ntTSL 4 BASIC12.44□□□□□ -0.42
VAMP1P23763 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
VAMP1P23763 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.44□□□□□ -0.42
VAMP1P23763 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.44□□□□□ -0.42
VAMP1P23763 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.44□□□□□ -0.42
VAMP1P23763 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC12.44□□□□□ -0.42
VAMP1P23763 AC034105.1-201ENST00000563488 319 ntBASIC12.44□□□□□ -0.42
VAMP1P23763 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 RN7SL602P-201ENST00000578326 324 ntBASIC12.44□□□□□ -0.42
VAMP1P23763 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.44□□□□□ -0.42
VAMP1P23763 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.44□□□□□ -0.42
VAMP1P23763 AC099654.11-201ENST00000638857 294 ntBASIC12.44□□□□□ -0.42
VAMP1P23763 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
VAMP1P23763 AF228730.6-201ENST00000641497 218 ntBASIC12.44□□□□□ -0.42
VAMP1P23763 AC084121.3-201ENST00000641716 218 ntBASIC12.44□□□□□ -0.42
VAMP1P23763 AC092902.6-201ENST00000641783 218 ntBASIC12.44□□□□□ -0.42
VAMP1P23763 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.44□□□□□ -0.42
VAMP1P23763 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VAMP1P23763 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VAMP1P23763 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.44□□□□□ -0.42
VAMP1P23763 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VAMP1P23763 Z97205.2-201ENST00000564697 1639 ntBASIC12.44□□□□□ -0.42
VAMP1P23763 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
VAMP1P23763 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VAMP1P23763 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 AC090114.2-201ENST00000608477 7054 ntBASIC12.43□□□□□ -0.42
VAMP1P23763 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 AC011840.2-201ENST00000563063 1520 ntBASIC12.43□□□□□ -0.42
VAMP1P23763 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms