Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
ATF1P18846 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.89□□□□□ -0.35
ATF1P18846 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATF1P18846 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATF1P18846 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATF1P18846 SLC7A15P-201ENST00000424028 1363 ntBASIC12.89□□□□□ -0.35
ATF1P18846 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.89□□□□□ -0.35
ATF1P18846 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATF1P18846 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.89□□□□□ -0.35
ATF1P18846 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATF1P18846 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ATF1P18846 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ATF1P18846 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ATF1P18846 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ATF1P18846 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ATF1P18846 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATF1P18846 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ATF1P18846 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
ATF1P18846 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ATF1P18846 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATF1P18846 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ATF1P18846 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.89□□□□□ -0.35
ATF1P18846 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 KLF2P2-201ENST00000416807 1039 ntBASIC12.88□□□□□ -0.35
ATF1P18846 SOCS2P1-201ENST00000417727 557 ntBASIC12.88□□□□□ -0.35
ATF1P18846 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.88□□□□□ -0.35
ATF1P18846 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.88□□□□□ -0.35
ATF1P18846 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.88□□□□□ -0.35
ATF1P18846 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.88□□□□□ -0.35
ATF1P18846 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 AL359711.2-201ENST00000563105 872 ntBASIC12.88□□□□□ -0.35
ATF1P18846 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.88□□□□□ -0.35
ATF1P18846 AC124283.3-201ENST00000570869 594 ntBASIC12.88□□□□□ -0.35
ATF1P18846 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.88□□□□□ -0.35
ATF1P18846 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.88□□□□□ -0.35
ATF1P18846 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.88□□□□□ -0.35
ATF1P18846 AC093726.1-201ENST00000608064 963 ntBASIC12.88□□□□□ -0.35
ATF1P18846 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 AC008761.3-201ENST00000624803 892 ntBASIC12.88□□□□□ -0.35
ATF1P18846 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
ATF1P18846 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATF1P18846 KRT8P35-201ENST00000483942 1338 ntBASIC12.88□□□□□ -0.35
ATF1P18846 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ATF1P18846 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ATF1P18846 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ATF1P18846 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATF1P18846 AL136172.1-201ENST00000598590 1394 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms