Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CTLA4P16410 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.98□□□□□ -0.33
CTLA4P16410 AC006001.1-201ENST00000325130 474 ntBASIC12.98□□□□□ -0.33
CTLA4P16410 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.98□□□□□ -0.33
CTLA4P16410 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.98□□□□□ -0.33
CTLA4P16410 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.98□□□□□ -0.33
CTLA4P16410 CICP12-201ENST00000455801 843 ntBASIC12.98□□□□□ -0.33
CTLA4P16410 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.98□□□□□ -0.33
CTLA4P16410 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CTLA4P16410 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.98□□□□□ -0.33
CTLA4P16410 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.98□□□□□ -0.33
CTLA4P16410 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.98□□□□□ -0.33
CTLA4P16410 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.98□□□□□ -0.33
CTLA4P16410 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
CTLA4P16410 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CTLA4P16410 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CTLA4P16410 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTLA4P16410 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CTLA4P16410 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
CTLA4P16410 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.97□□□□□ -0.33
CTLA4P16410 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.97□□□□□ -0.33
CTLA4P16410 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CTLA4P16410 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.97□□□□□ -0.33
CTLA4P16410 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.97□□□□□ -0.33
CTLA4P16410 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CTLA4P16410 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.97□□□□□ -0.33
CTLA4P16410 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CTLA4P16410 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.97□□□□□ -0.33
CTLA4P16410 MIR1202-201ENST00000408529 83 ntBASIC12.97□□□□□ -0.33
CTLA4P16410 NME2P1-201ENST00000426182 414 ntBASIC12.97□□□□□ -0.33
CTLA4P16410 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.97□□□□□ -0.33
CTLA4P16410 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.97□□□□□ -0.33
CTLA4P16410 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.97□□□□□ -0.33
CTLA4P16410 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.97□□□□□ -0.33
CTLA4P16410 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.97□□□□□ -0.33
CTLA4P16410 MIR3197-201ENST00000582241 73 ntBASIC12.97□□□□□ -0.33
CTLA4P16410 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.97□□□□□ -0.33
CTLA4P16410 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.97□□□□□ -0.33
CTLA4P16410 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.97□□□□□ -0.33
CTLA4P16410 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.97□□□□□ -0.33
CTLA4P16410 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CTLA4P16410 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
CTLA4P16410 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTLA4P16410 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
CTLA4P16410 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms