Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPRFP10586 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPRFP10586 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPRFP10586 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PTPRFP10586 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPRFP10586 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPRFP10586 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PTPRFP10586 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPRFP10586 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PTPRFP10586 OR2W2P-201ENST00000406313 909 ntBASIC16.28■□□□□ 0.2
PTPRFP10586 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPRFP10586 AC093300.1-201ENST00000510368 1201 ntBASIC16.28■□□□□ 0.2
PTPRFP10586 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPRFP10586 TYMSP2-201ENST00000589501 424 ntBASIC16.28■□□□□ 0.2
PTPRFP10586 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPRFP10586 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTPRFP10586 AC005274.1-201ENST00000623460 802 ntBASIC16.28■□□□□ 0.2
PTPRFP10586 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPRFP10586 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPRFP10586 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PTPRFP10586 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPRFP10586 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPRFP10586 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPRFP10586 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPRFP10586 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PTPRFP10586 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPRFP10586 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPRFP10586 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPRFP10586 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPRFP10586 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPRFP10586 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPRFP10586 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPRFP10586 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPRFP10586 HLA-DMA-202ENST00000395303 1007 ntBASIC16.27■□□□□ 0.2
PTPRFP10586 AP000244.1-201ENST00000424582 201 ntBASIC16.27■□□□□ 0.2
PTPRFP10586 HLA-DPA2-205ENST00000433582 733 ntBASIC16.27■□□□□ 0.2
PTPRFP10586 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPRFP10586 RN7SL351P-201ENST00000469306 248 ntBASIC16.27■□□□□ 0.2
PTPRFP10586 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPRFP10586 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.27■□□□□ 0.2
PTPRFP10586 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPRFP10586 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPRFP10586 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PTPRFP10586 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPRFP10586 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPRFP10586 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPRFP10586 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPRFP10586 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPRFP10586 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPRFP10586 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPRFP10586 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPRFP10586 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PTPRFP10586 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPRFP10586 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPRFP10586 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPRFP10586 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPRFP10586 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPRFP10586 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPRFP10586 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPRFP10586 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPRFP10586 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPRFP10586 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPRFP10586 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPRFP10586 OR10N1P-201ENST00000392758 869 ntBASIC16.27■□□□□ 0.19
PTPRFP10586 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PTPRFP10586 FAM21EP-201ENST00000417804 985 ntBASIC16.27■□□□□ 0.19
PTPRFP10586 KRT18P62-201ENST00000446618 1287 ntBASIC16.27■□□□□ 0.19
PTPRFP10586 RN7SL128P-201ENST00000467883 305 ntBASIC16.27■□□□□ 0.19
PTPRFP10586 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.27■□□□□ 0.19
PTPRFP10586 AL359219.1-201ENST00000556311 934 ntBASIC16.27■□□□□ 0.19
PTPRFP10586 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPRFP10586 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.27■□□□□ 0.19
PTPRFP10586 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPRFP10586 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPRFP10586 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPRFP10586 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
PTPRFP10586 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPRFP10586 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPRFP10586 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPRFP10586 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PTPRFP10586 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPRFP10586 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPRFP10586 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPRFP10586 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPRFP10586 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPRFP10586 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPRFP10586 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms