Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC8.98□□□□□ -0.97
PKHD1P08F94 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 CETN3-205ENST00000522842 664 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 BX322562.1-201ENST00000617004 561 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 GARS-210ENST00000627489 324 ntTSL 4 BASIC8.98□□□□□ -0.97
PKHD1P08F94 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 AC020658.6-201ENST00000623564 1870 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 AL162727.3-201ENST00000635661 2787 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 LCK-206ENST00000373564 2137 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 POP5-201ENST00000341039 913 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 MIR339-201ENST00000362153 94 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 RNA5SP491-201ENST00000362936 118 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
PKHD1P08F94 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 IQCF4-203ENST00000428561 420 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 RNF7-205ENST00000480908 782 ntTSL 4 BASIC8.98□□□□□ -0.97
PKHD1P08F94 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC8.98□□□□□ -0.97
PKHD1P08F94 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 AC009812.1-201ENST00000605948 1059 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 AL031673.1-201ENST00000611460 466 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 AC006987.1-201ENST00000413610 527 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC8.98□□□□□ -0.97
PKHD1P08F94 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC8.98□□□□□ -0.97
PKHD1P08F94 RPL18AP15-201ENST00000430258 517 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 AC093106.1-201ENST00000437271 352 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC8.98□□□□□ -0.97
PKHD1P08F94 AP000533.1-201ENST00000456143 1177 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 AC140658.4-201ENST00000561990 352 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 AL009176.1-201ENST00000607876 650 ntBASIC8.98□□□□□ -0.97
PKHD1P08F94 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC8.98□□□□□ -0.97
PKHD1P08F94 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
PKHD1P08F94 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
PKHD1P08F94 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC8.98□□□□□ -0.97
PKHD1P08F94 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PKHD1P08F94 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
PKHD1P08F94 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
PKHD1P08F94 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PKHD1P08F94 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
PKHD1P08F94 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
PKHD1P08F94 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PKHD1P08F94 U3.5-201ENST00000363448 216 ntBASIC8.97□□□□□ -0.97
PKHD1P08F94 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PKHD1P08F94 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PKHD1P08F94 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PKHD1P08F94 FTH1P18-201ENST00000412071 549 ntBASIC8.97□□□□□ -0.97
PKHD1P08F94 ALMS1P1-201ENST00000428767 921 ntBASIC8.97□□□□□ -0.97
PKHD1P08F94 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC8.97□□□□□ -0.97
PKHD1P08F94 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC8.97□□□□□ -0.97
PKHD1P08F94 AC015818.3-201ENST00000583797 589 ntBASIC8.97□□□□□ -0.97
PKHD1P08F94 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC8.97□□□□□ -0.97
PKHD1P08F94 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PKHD1P08F94 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PKHD1P08F94 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC8.97□□□□□ -0.97
PKHD1P08F94 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms