Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TPM3P06753 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
TPM3P06753 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM3P06753 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.46■□□□□ 0.23
TPM3P06753 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
TPM3P06753 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM3P06753 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
TPM3P06753 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.46■□□□□ 0.23
TPM3P06753 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM3P06753 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM3P06753 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM3P06753 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.46■□□□□ 0.23
TPM3P06753 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TPM3P06753 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
TPM3P06753 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.46■□□□□ 0.23
TPM3P06753 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 AGAP10P-201ENST00000454844 2418 ntBASIC16.46■□□□□ 0.23
TPM3P06753 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
TPM3P06753 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TPM3P06753 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TPM3P06753 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TPM3P06753 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 DRD5P1-201ENST00000456605 1438 ntBASIC16.45■□□□□ 0.22
TPM3P06753 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 TP73-201ENST00000346387 4854 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TPM3P06753 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 AL022342.1-201ENST00000400363 863 ntBASIC16.45■□□□□ 0.22
TPM3P06753 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.45■□□□□ 0.22
TPM3P06753 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 AC107373.2-201ENST00000607735 490 ntBASIC16.45■□□□□ 0.22
TPM3P06753 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 HSPA8P5-201ENST00000456928 2069 ntBASIC16.45■□□□□ 0.22
TPM3P06753 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TPM3P06753 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TPM3P06753 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM3P06753 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC16.44■□□□□ 0.22
TPM3P06753 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
TPM3P06753 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.44■□□□□ 0.22
TPM3P06753 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TPM3P06753 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.44■□□□□ 0.22
TPM3P06753 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.44■□□□□ 0.22
TPM3P06753 AC118758.2-201ENST00000614242 2813 ntBASIC16.44■□□□□ 0.22
TPM3P06753 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TPM3P06753 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
TPM3P06753 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TPM3P06753 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM3P06753 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.44■□□□□ 0.22
TPM3P06753 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.44■□□□□ 0.22
TPM3P06753 AC211486.1-202ENST00000416371 468 ntBASIC16.44■□□□□ 0.22
TPM3P06753 AC211476.1-201ENST00000503899 468 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms