Protein–RNA interactions for Protein: P05783

KRT18, Keratin, type I cytoskeletal 18, humanhuman

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P05783 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT18P05783 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT18P05783 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT18P05783 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT18P05783 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT18P05783 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT18P05783 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT18P05783 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT18P05783 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT18P05783 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT18P05783 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT18P05783 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT18P05783 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT18P05783 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KRT18P05783 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 FAM21FP-201ENST00000426241 1131 ntBASIC16.4■□□□□ 0.22
KRT18P05783 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT18P05783 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT18P05783 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT18P05783 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT18P05783 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT18P05783 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT18P05783 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT18P05783 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT18P05783 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT18P05783 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT18P05783 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT18P05783 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT18P05783 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
KRT18P05783 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
KRT18P05783 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.39■□□□□ 0.22
KRT18P05783 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
KRT18P05783 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
KRT18P05783 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT18P05783 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KRT18P05783 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT18P05783 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT18P05783 GK-202ENST00000378941 458 ntTSL 3 BASIC16.39■□□□□ 0.21
KRT18P05783 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
KRT18P05783 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT18P05783 CHMP1AP1-201ENST00000445563 662 ntBASIC16.39■□□□□ 0.21
KRT18P05783 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT18P05783 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT18P05783 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KRT18P05783 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT18P05783 AC027601.3-201ENST00000622907 509 ntBASIC16.39■□□□□ 0.21
KRT18P05783 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT18P05783 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT18P05783 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
KRT18P05783 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
KRT18P05783 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT18P05783 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
KRT18P05783 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT18P05783 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT18P05783 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.38■□□□□ 0.21
KRT18P05783 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT18P05783 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT18P05783 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 AL035414.1-201ENST00000451327 857 ntBASIC16.38■□□□□ 0.21
KRT18P05783 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT18P05783 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT18P05783 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms