Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.21■□□□□ 0.03
SOD2P04179 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.21■□□□□ 0.03
SOD2P04179 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.21■□□□□ 0.03
SOD2P04179 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.21■□□□□ 0.03
SOD2P04179 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.21■□□□□ 0.03
SOD2P04179 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.21■□□□□ 0.03
SOD2P04179 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SOD2P04179 AC140113.1-201ENST00000603467 169 ntBASIC15.21■□□□□ 0.03
SOD2P04179 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SOD2P04179 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SOD2P04179 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.21■□□□□ 0.03
SOD2P04179 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.21■□□□□ 0.03
SOD2P04179 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.21■□□□□ 0.03
SOD2P04179 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.21■□□□□ 0.03
SOD2P04179 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SOD2P04179 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SOD2P04179 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SOD2P04179 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SOD2P04179 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SOD2P04179 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.2■□□□□ 0.02
SOD2P04179 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.2■□□□□ 0.02
SOD2P04179 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.2■□□□□ 0.02
SOD2P04179 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SOD2P04179 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SOD2P04179 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SOD2P04179 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.2■□□□□ 0.02
SOD2P04179 AL357563.1-201ENST00000404728 395 ntBASIC15.2■□□□□ 0.02
SOD2P04179 AC006987.1-201ENST00000413610 527 ntBASIC15.2■□□□□ 0.02
SOD2P04179 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.2■□□□□ 0.02
SOD2P04179 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.2■□□□□ 0.02
SOD2P04179 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.2■□□□□ 0.02
SOD2P04179 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.2■□□□□ 0.02
SOD2P04179 AC138466.5-201ENST00000624002 808 ntBASIC15.2■□□□□ 0.02
SOD2P04179 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 AC067930.6-201ENST00000623257 4947 ntBASIC15.2■□□□□ 0.02
SOD2P04179 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.2■□□□□ 0.02
SOD2P04179 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.2■□□□□ 0.02
SOD2P04179 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.2■□□□□ 0.02
SOD2P04179 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SOD2P04179 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.2■□□□□ 0.02
SOD2P04179 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOD2P04179 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SOD2P04179 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.19■□□□□ 0.02
SOD2P04179 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.19■□□□□ 0.02
SOD2P04179 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.19■□□□□ 0.02
SOD2P04179 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SOD2P04179 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
SOD2P04179 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.19■□□□□ 0.02
SOD2P04179 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.19■□□□□ 0.02
SOD2P04179 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.19■□□□□ 0.02
SOD2P04179 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.19■□□□□ 0.02
SOD2P04179 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.19■□□□□ 0.02
SOD2P04179 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 SCARNA12-201ENST00000459155 270 ntBASIC15.19■□□□□ 0.02
SOD2P04179 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SOD2P04179 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.19■□□□□ 0.02
SOD2P04179 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
SOD2P04179 AL021707.6-201ENST00000609212 491 ntBASIC15.19■□□□□ 0.02
SOD2P04179 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.19■□□□□ 0.02
SOD2P04179 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 AC092384.3-202ENST00000564646 2873 ntBASIC15.19■□□□□ 0.02
SOD2P04179 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.19■□□□□ 0.02
SOD2P04179 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 AC067931.2-201ENST00000623655 2003 ntBASIC15.19■□□□□ 0.02
SOD2P04179 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
SOD2P04179 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SOD2P04179 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SOD2P04179 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SOD2P04179 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms