Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-AP01891 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
HLA-AP01891 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-AP01891 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.42□□□□□ -0.42
HLA-AP01891 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-AP01891 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-AP01891 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-AP01891 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.42□□□□□ -0.42
HLA-AP01891 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-AP01891 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-AP01891 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-AP01891 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-AP01891 AC011498.7-201ENST00000624986 2027 ntBASIC12.42□□□□□ -0.42
HLA-AP01891 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-AP01891 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-AP01891 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
HLA-AP01891 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-AP01891 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-AP01891 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-AP01891 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
HLA-AP01891 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-AP01891 MTND6P24-201ENST00000440466 518 ntBASIC12.41□□□□□ -0.42
HLA-AP01891 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-AP01891 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.41□□□□□ -0.42
HLA-AP01891 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-AP01891 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-AP01891 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-AP01891 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.41□□□□□ -0.42
HLA-AP01891 MIR6074-201ENST00000612054 107 ntBASIC12.41□□□□□ -0.42
HLA-AP01891 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
HLA-AP01891 Z92544.3-201ENST00000624747 417 ntBASIC12.41□□□□□ -0.42
HLA-AP01891 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-AP01891 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-AP01891 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-AP01891 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-AP01891 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
HLA-AP01891 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
HLA-AP01891 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
HLA-AP01891 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
HLA-AP01891 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-AP01891 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
HLA-AP01891 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 KRT18P28-201ENST00000453838 1332 ntBASIC12.4□□□□□ -0.42
HLA-AP01891 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HLA-AP01891 REXO1L1P-201ENST00000379010 6598 ntBASIC12.4□□□□□ -0.42
HLA-AP01891 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.4□□□□□ -0.42
HLA-AP01891 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HLA-AP01891 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms